Lower and upper thresholds for predicted values
Source:R/layer_threshold_preds.R
layer_threshold.Rd
This postprocessing step is used to set prediction values that are smaller than the lower threshold or higher than the upper threshold equal to the threshold values.
Usage
layer_threshold(
frosting,
...,
lower = 0,
upper = Inf,
id = rand_id("threshold")
)
Arguments
- frosting
a
frosting
postprocessor- ...
<
tidy-select
> One or more unquoted expressions separated by commas. Variable names can be used as if they were positions in the data frame, so expressions likex:y
can be used to select a range of variables. Typical usage is.pred
to threshold predictions to a range (say, nonnegative).- lower
Lower threshold for the prediction values. That is, any predictions that are less than this lower bound are set to it. Default value is
0
.- upper
Upper threshold for the prediction values. That is, any predictions that are greater than this upper bound are set to it. Default value is
Inf
.- id
a random id string
Examples
library(dplyr)
jhu <- case_death_rate_subset %>%
filter(time_value < "2021-03-08", geo_value %in% c("ak", "ca", "ar"))
r <- epi_recipe(jhu) %>%
step_epi_lag(death_rate, lag = c(0, 7, 14)) %>%
step_epi_ahead(death_rate, ahead = 7) %>%
step_epi_naomit()
wf <- epi_workflow(r, linear_reg()) %>% fit(jhu)
f <- frosting() %>%
layer_predict() %>%
layer_threshold(.pred, lower = 0.180, upper = 0.310)
wf <- wf %>% add_frosting(f)
p <- forecast(wf)
p
#> An `epi_df` object, 3 x 3 with metadata:
#> * geo_type = state
#> * time_type = day
#> * as_of = 2022-05-31 19:08:25.791826
#>
#> # A tibble: 3 × 3
#> geo_value time_value .pred
#> * <chr> <date> <dbl>
#> 1 ak 2021-03-07 0.18
#> 2 ar 2021-03-07 0.18
#> 3 ca 2021-03-07 0.31